How to Make Superhero Muffins (Gluten-Free Option!)

If you’re looking for a nutritious and energizing snack, these superhero muffins are the perfect choice. Inspired by Shalane Flanagan and Elyse Kopecky’s Superhero Muffins from their cookbook Run Fast. Eat Slow: Nourishing Recipes for Athletes, this version is a fully vegan and gluten-free twist on their athlete-fueling classic.

Designed to provide long-lasting energy, these muffins are packed with wholesome ingredients like almond flour, flaxseeds, and naturally sweet bananas. Whether you need a quick breakfast, a post-workout bite, or a satisfying snack, they’re a great way to fuel your body with plant-based goodness.

This recipe stays true to the original’s nourishing spirit while making it accessible to those following a vegan and gluten-free lifestyle. Simple to make and endlessly customizable with add-ins like blueberries or dark chocolate, these muffins will quickly become a staple in your kitchen. Let’s get baking!

What Makes These Superhero Muffins So Special?

Close-Up of Vegan Superhero Muffins

Whether you’re fueling up for a busy morning, a workout, or just need a satisfying snack, these superhero muffins deliver the perfect balance of flavor, nutrition, and convenience. Designed to energize and nourish, they fit seamlessly into any lifestyle while being completely vegan and gluten-free. Here’s why they deserve a place in your kitchen.

Energy-Boosting & Nutrient-Dense – Perfect for Breakfast, Snacks, or Post-Workout

These muffins aren’t just a treat—they’re a powerhouse of natural energy. Packed with fiber, plant-based protein, and healthy fats, they provide long-lasting fuel without the sugar crash. Instead of relying on processed ingredients, they use:

  • Almond flour and flaxseeds for sustained energy and essential nutrients.
  • Bananas and maple syrup for natural sweetness and quick fuel.
  • Walnuts or seeds for heart-healthy fats and added crunch.

Enjoy them as a grab-and-go breakfast, a pre-workout boost, or a midday snack to keep you feeling full and focused.

Gluten-Free & Vegan-Friendly – Ideal for Special Dietary Needs

If you follow a gluten-free or plant-based diet, these muffins are a perfect fit. By swapping traditional wheat flour for gluten-free alternatives like almond or oat flour, they remain light and fluffy while catering to dietary sensitivities. Plus, they’re 100% dairy-free and egg-free, using:

  • Flax eggs or chia seeds as a natural binder.
  • Coconut oil or nut butter for moisture and richness.
  • Dairy-free chocolate chips or fresh fruit for added flavor.

Whether you have dietary restrictions or just love wholesome, clean eating, these muffins check all the boxes without compromising on taste.

Meal-Prep Friendly – Make Ahead and Store for a Quick Grab-and-Go Snack

These superhero muffins are perfect for meal prep, saving you time during the week. A single batch makes enough to enjoy for several days, and they store beautifully:

  • Refrigeration: Keep in an airtight container for up to 5 days for a fresh snack anytime.
  • Freezing: Store in a freezer-safe bag for up to 3 months—just thaw or warm in the microwave before eating.
  • On-the-Go: Pack one in your bag for a nutritious bite wherever you are.

With their perfect texture, rich flavors, and wholesome ingredients, these muffins will quickly become a favorite in your routine. Let’s get baking!

Ingredients You’ll Need

Ingredients for Vegan Superhero Muffins on a Plain Background

The beauty of these superhero muffins lies in their simple yet powerful ingredients. Each component is carefully chosen to provide nutrition, flavor, and the perfect texture while keeping the recipe completely gluten-free and vegan. Here’s what you’ll need:

Base Ingredients

A strong foundation ensures the muffins are light, fluffy, and naturally sweet without refined sugar. These key ingredients provide structure while keeping them moist and satisfying.

  • Almond flour or oat flour – A naturally gluten-free base that adds a delicate, nutty flavor.
  • Mashed bananas or unsweetened applesauce – These ingredients act as natural sweeteners and keep the muffins soft and tender.

Protein & Healthy Fats

To make these muffins truly nourishing, a mix of healthy fats and plant-based protein is essential. They contribute to satiety, sustained energy, and great texture.

  • Ground flaxseed or chia seeds – These provide fiber, omega-3 fatty acids, and act as natural binders in place of eggs.
  • Nuts or seeds – Walnuts, almonds, or sunflower seeds add crunch and extra protein, making each bite satisfying.

Natural Sweeteners & Flavor

Instead of processed sugar, these muffins rely on natural sweeteners and warm flavors to create a balanced, subtly sweet taste.

  • Maple syrup or coconut sugar – Adds a hint of natural sweetness without overpowering the other flavors.
  • Cinnamon, vanilla extract, and cacao nibs – Enhance the overall taste with warmth, depth, and a slight chocolatey richness.

Optional Add-ins for Extra Nutrition

For even more variety, texture, and nutrients, try incorporating some of these delicious mix-ins.

  • Dark chocolate chips – A vegan-friendly indulgence that adds a rich, slightly bitter contrast.
  • Blueberries, shredded carrots, or zucchini – Boosts fiber, vitamins, and natural moisture while adding subtle bursts of flavor.

These superhero muffins combine wholesome ingredients to create a delicious, nutrient-packed treat that will keep you energized throughout the day. Now, let’s get baking!

Step-by-Step Instructions for Perfect Superhero Muffins

Step-by-Step Process for Making Vegan Superhero Muffins

Making these superhero muffins is simple and rewarding. Follow these easy steps to create a batch of delicious, nutrient-packed muffins that are perfect for breakfast, snacks, or post-workout fuel.

Preheat & Prepare

Set your oven to 350°F (175°C) and line a muffin tin with parchment liners or lightly grease it to prevent sticking. This ensures even baking and easy removal.

Mix Dry Ingredients

In a large mixing bowl, whisk together the almond flour, baking powder, cinnamon, and ground flaxseed. This helps evenly distribute the ingredients and prevents clumps, giving the muffins a light and fluffy texture.

Blend Wet Ingredients

In a separate bowl, mash the bananas until smooth. Add the maple syrup and vanilla extract, stirring until well combined. These ingredients provide natural sweetness and moisture, creating a soft, tender muffin.

Combine & Bake

Slowly fold the wet ingredients into the dry mixture, stirring just until combined. Avoid overmixing, as this can make the muffins dense. Gently fold in your chosen mix-ins, such as dark chocolate chips, blueberries, or shredded carrots.

Spoon the batter evenly into the prepared muffin tin, filling each cup about three-quarters full. Bake for 20 to 25 minutes, or until a toothpick inserted into the center comes out clean. Let the muffins cool in the tin for a few minutes before transferring them to a wire rack to cool completely.

Enjoy these superhero muffins warm or store them for a quick, nutritious snack throughout the week!

Storage & Meal Prep Tips

Freezing Vegan Muffins in a Ziplock Bag for Meal Prep

These superhero muffins are perfect for meal prep, making it easy to have a nutritious snack or breakfast ready whenever you need it. Here’s how to store them properly to maintain their freshness and flavor.

Refrigeration: Store in an airtight container for up to 5 days

Once the muffins have completely cooled, place them in an airtight container and store them in the refrigerator. This keeps them fresh for up to five days while preserving their moisture. For the best taste and texture, allow them to come to room temperature before eating or warm them slightly before serving.

Freezing: Freeze in a ziplock bag for up to 3 months

For long-term storage, these muffins freeze beautifully. Arrange them in a single layer inside a ziplock bag or freezer-safe container, ensuring they don’t get squished. Label the bag with the date, and store them in the freezer for up to three months. When ready to eat, simply thaw overnight in the refrigerator or warm them up straight from frozen.

Reheating: Microwave for 10-15 seconds or toast for extra crunch

To enjoy these muffins warm, pop them in the microwave for 10-15 seconds for a soft, fresh-out-of-the-oven texture. For a crispier bite, slice them in half and toast them lightly in a pan or toaster oven. Pair with a drizzle of nut butter or a dollop of dairy-free yogurt for an extra delicious treat.

By following these storage methods, you can keep your superhero muffins fresh and conveniently available whenever you need a nourishing snack or a quick energy boost!

Conclusion

Now it’s your turn to bake a batch of these wholesome, energy-packed superhero muffins! Whether you enjoy them for breakfast, as a post-workout snack, or as a healthy treat, they’re sure to become a favorite in your kitchen.

Give this recipe a try and let us know how it turned out in the comments! If you loved it, don’t forget to share your creations on Pinterest and Instagram—tag us so we can see your delicious results!

Looking for more vegan and gluten-free recipes? Explore our blog for more nourishing and easy-to-make dishes that will keep you fueled and satisfied. Happy baking!

Frequently Asked Questions (FAQs)

Can I make these nut-free?

Yes! If you need a nut-free version, swap almond flour for sunflower seed flour or finely ground oat flour. This keeps the muffins light and fluffy while maintaining a naturally gluten-free base.

Can I substitute oat flour?

Absolutely! Oat flour works well, but it tends to absorb more moisture than almond flour. To prevent the muffins from becoming too dry, consider adding an extra tablespoon of liquid, such as plant-based milk or applesauce.

Are these muffins kid-friendly?

Definitely! These superhero muffins are naturally sweetened with bananas and maple syrup, making them a healthy and delicious snack for kids. You can also add mini dairy-free chocolate chips or blueberries to make them even more appealing to little ones.

Can I make them without added sugar?

Yes! You can skip the maple syrup or coconut sugar and rely solely on mashed bananas for natural sweetness. If you prefer a slightly sweeter taste, adding a few extra chopped dates or raisins can enhance the flavor without refined sugars.

These simple modifications make it easy to customize the muffins to suit different dietary needs while keeping them just as delicious and nutritious!

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How to Make Superhero Muffins (Gluten-Free Option!)

Make delicious and nutritious superhero muffins with this easy vegan and gluten-free recipe. Perfect for breakfast, snacks, or meal prep. Ready in 30 minutes!
Prep Time 10 minutes
Cook Time 20 minutes
Total Time 30 minutes
Course Breakfast, Snack
Cuisine American
Servings 12 muffins
Calories 180 kcal

Ingredients
  

Base Ingredients

  • 2 cups almond flour or oat flour
  • 2 ripe bananas mashed (or ½ cup unsweetened applesauce)

Protein & Healthy Fats

  • 2 tablespoons ground flaxseed or chia seeds
  • ½ cup chopped walnuts almonds, or sunflower seeds

Natural Sweeteners & Flavor

  • ¼ cup maple syrup or coconut sugar
  • 1 teaspoon cinnamon
  • 1 teaspoon vanilla extract
  • 2 tablespoons cacao nibs

Optional Add-ins for Extra Nutrition

  • ¼ cup vegan dark chocolate chips
  • ½ cup blueberries shredded carrots, or zucchini

Instructions
 

Preheat & Prepare

  • Preheat the oven to 350°F (175°C).
  • Line a muffin tin with parchment liners or lightly grease it.

Mix Dry Ingredients

  • In a large bowl, whisk together the almond flour (or oat flour), baking powder, cinnamon, and ground flaxseed.

Blend Wet Ingredients

  • In a separate bowl, mash the bananas.
  • Stir in maple syrup and vanilla extract until well combined.

Combine & Bake

  • Gradually fold the wet ingredients into the dry mixture.
  • Gently mix in the optional add-ins, like chocolate chips or blueberries.
  • Divide the batter evenly into the muffin tin, filling each about three-quarters full.
  • Bake for 20-25 minutes or until a toothpick inserted in the center comes out clean.

Cool & Enjoy

  • Let the muffins cool in the tin for a few minutes before transferring them to a wire rack.
  • Serve warm or store for later.

Notes

Nutrition Information (Per Serving)
  • Calories: ~180 kcal
  • Carbohydrates: 22g
  • Protein: 5g
  • Fat: 8g
  • Fiber: 4g
  • Sugar: 8g
Keyword Gluten-Free Muffins, Healthy Muffins, Superhero Muffins, Vegan Muffins

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